|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Deletion
|
OCR67
(D)
,
OCR67-2
(D)
,
OCR67-5
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
ldrC
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
ldrC
Search strains by all related name:
ldrC b4423 ECK1208 JW5959
|
General information (Go to Linear View: )
|
|
Gene Name
|
ldrC
|
|
Alternative name
|
b4423,ECK1208,JW5959
|
|
Location, Length
|
1,269,461 - 1,269,568
(
-
)
;
27.36
min
;
108
(bp) ,
35
(aa)
|
|
Product
|
toxic polypeptide, small
|
|
Operon Name
|
ldrC
|
|
Note
|
small toxic polypeptide
|
|
Function
|
component of addiction module,cell killing
|
|
Gene Ontology
|
|
|
PID
|
48994882
|
EC number
(KEGG Pathway)
|
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
ldrC
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
|
|
PSI-BLAST
|
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
|
| Sequences |
Amino acid
FASTA format
|
0001 MTLAQFAMIF WHDLAAPILA GIITAAIVSW WRNRK
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 acgttgagag gtaaaacctg acaacaaaac
-070 gggggctaat cttgaaacca gacacttcaa gaatagccgc aaaatgttgt cattacaaca aggcggctat
0001 atgacgctcg cgcagtttgc catgattttc tggcacgacc tggcagcacc gatcctggcg ggaattatta
0071 ccgcagcgat tgtcagctgg tggcgtaacc ggaagtaagg tgaaaacggg cgtcaggctg ccgtgatggc
0141 aatatgcgcc cgaaaccggc cgcaggggta acagcctgcg gccatttttg tctttatctc ttccacaa
|
