|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
Escherichia coli and Salmonella, Cellular and Molecular Biology Second Edition. ASM Press. 1996
Neidhart, F.C.
|
|
|
Deletion
|
20
(LD)
,
OCR70
(D)
,
OCR70,L90-5 (LD 20-1_P/O)
(D)
,
OCR70,L90-6 (LD 20-1_P/O & 20-2TC)
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
sapC
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
sapC
Search strains by all related name:
sapC b1292 ECK1287 f296 JW1285
|
General information (Go to Linear View: )
|
|
Gene Name
|
sapC
|
|
Alternative name
|
b1292,ECK1287,f296,JW1285
|
|
Location, Length
|
1,351,652 - 1,352,542
(
-
)
;
29.13
min
;
891
(bp) ,
296
(aa)
|
|
Product
|
antimicrobial peptide transport ABC transporter permease
|
|
Operon Name
|
sapABCDF
|
|
Note
|
homolog of Salmonella peptide transport permease protein; membrane component of ABC superfamily; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane
|
|
Function
|
putative transport; Not classified
|
|
Gene Ontology
|
GO:0005215
;
transporter activity ( sapC )
GO:0005886
;
plasma membrane ( sapC )
GO:0006810
;
transport ( sapC )
GO:0006857
;
oligopeptide transport ( sapC )
GO:0015031
;
protein transport ( sapC )
GO:0015198
;
oligopeptide transporter activity ( sapC )
GO:0016020
;
membrane ( sapC )
GO:0016021
;
integral to membrane ( sapC )
|
|
PID
|
1787549
|
EC number
(KEGG Pathway)
|
|
|
SWISS-PROT
(
Show details
[
1
more]
)
|
Entry name(Acc.no)
|
SAPC_ECOLI
(
Q47624
)
|
|
- Protein name
|
Peptide transport system permease protein sapC.
|
|
- Synonyms
|
|
|
- Gene name
|
Name=sapC; OrderedLocusNames=b1292, c1769, SF1297, S1379;
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
sapC
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
Peptide transport system permease protein sapC
|
|
PSI-BLAST
|
Peptide transport system permease protein sapC
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
predicted antimicrobial peptide transporter subunit [Escherichia coli K12]
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
ASN_GLYCOSYLATION
PKC_PHOSPHO_SITE
MYRISTYL
|
| Sequences |
Amino acid
FASTA format
|
0001 MPYDSVYSEK RPPGTLRTAW RKFYSDASAM VGLYGCAGLA VLCIFGGWFA PYGIDQQFLG YQLLPPSWSR
0071 YGEVSFFLGT DDLGRDVLSR LLSGAAPTVG GAFVVTLAAT ICGLVLGTFA GATHGLRSAV LNHILDTLLA
0141 IPSLLLAIIV VAFAGPSLSH AMFAVWLALL PRMVRSIYSM VHDELEKEYV IAARLDGAST LNILWFAVMP
0211 NITAGLVTEI TRALSMAILD IAALGFLDLG AQLPSPEWGA MLGDALELIY VAPWTVMLPG AAIMISVLLV
0281 NLLGDGVRRA IIAGVE
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 tccgccggag tgatggtgtg tggctcactg
-070 gtcattattg ttaacgtgat ttctgatatt ttgggtgcca tggctaaccc tctgaaacat aaggaatggt
0001 atgccttacg atagcgtata cagcgaaaag cgcccgccgg gcacgctgcg taccgcctgg cgcaaatttt
0071 atagtgacgc ctctgcgatg gtcggcctgt acggctgcgc ggggctggct gtactgtgta tttttggcgg
0141 ctggtttgcg ccttacggca tcgaccagca atttctcggt tatcaattat tgccgccgtc atggtcgcgc
0211 tatggcgaag tttctttctt cctggggact gacgacctcg gacgcgatgt tttaagccgt ttactgagcg
0281 gagctgcgcc aaccgtgggt ggcgcatttg tggtgacgct tgccgcgacg atctgtggcc tggtactggg
0351 caccttcgcc ggggcgacac acggcctccg ctcagcggtg cttaaccata ttctggatac cttactggcg
0421 atcccttcgc tgctgttggc aattatcgtt gtagcgtttg ccggaccgag tttgtcccac gctatgtttg
0491 ctgtctggct ggcattgctg ccgcgtatgg tacgttcgat ttacagcatg gtgcatgacg aactggaaaa
0561 agagtacgtt atcgccgccc gtctggatgg cgcatcaacg ctgaatattc tctggtttgc tgtgatgcca
0631 aacatcaccg ccgggctggt caccgagatc acccgcgcac tgtcgatggc aattctcgat atcgccgcgc
0701 tgggctttct cgatctcggc gcacaactcc cctcgcctga atggggagcg atgctcggtg atgcgctgga
0771 actgatttat gtcgccccgt ggactgtcat gctgccaggt gcggcaatta tgattagcgt gttgttggtt
0841 aacctccttg gcgatggcgt tcgtcgtgcg attattgcgg gggtggaata atgccattac tcgatattcg
0911 taacctgacc attgaattta aaaccggtga tgagtgggtt aaagccgtcg accgggtaag tatgacctta
0981 accgaaggtg a
|
