|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Deletion
|
9-1
(LD)
,
DE(gpt-lac)5
,
OCR36,37-6 (LD 9C::Ap)
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
afuB
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
afuB
Search strains by all related name:
afuB b0263 ECK0265 f120 fbpB JW0255 orf358
|
General information (Go to Linear View: )
|
|
Gene Name
|
afuB
|
|
Alternative name
|
b0263,ECK0265,f120,fbpB,JW0255,orf358
|
|
Location, Length
|
278,038 - 278,385
(
-
)
;
5.99
min
;
348
(bp) ,
115
(aa)
|
|
Product
|
|
|
Operon Name
|
insAB-2A-2B-2-afuBC
|
|
Note
|
pseudogene, CP4-6 prophage; predicted ferric transporter subunit;Phage or Prophage Related
|
|
Function
|
|
|
Gene Ontology
|
GO:0005215
;
transporter activity ( fbpB )
GO:0005506
;
iron ion binding ( fbpB )
GO:0005886
;
plasma membrane ( fbpB )
GO:0006810
;
transport ( fbpB )
GO:0006811
;
ion transport ( fbpB )
GO:0006826
;
iron ion transport ( fbpB )
GO:0016020
;
membrane ( fbpB )
GO:0016021
;
integral to membrane ( fbpB )
|
|
PID
|
|
EC number
(KEGG Pathway)
|
|
|
SWISS-PROT
(
Show details
)
|
Entry name(Acc.no)
|
FBPB_ECOLI
(
P75681
)
|
|
- Protein name
|
Putative ferric transport system permease protein fbpB
|
|
- Synonyms
|
Fragment
|
|
- Gene name
|
Name=afuB; Synonyms=fbpB; OrderedLocusNames=b0263;
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
afuB
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
Putative ferric transport system permease protein fbpB
|
|
PSI-BLAST
|
Maltose transport system permease protein malG
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
CP4-6 prophage; predicted ferric trasnporter subunit [Escherichia coli K12]
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
PKC_PHOSPHO_SITE
CK2_PHOSPHO_SITE
TYR_PHOSPHO_SITE
MYRISTYL
|
| Sequences |
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 cggaagtcgc tgtcgttctc aaaatcggtg
-070 gagcagcatg acaaagtcat cgggcattat ctgaacataa aacactatca ataagttgga gtcattaccg
0001 ggccaaatcg ataaatcgct cgatgaagcc tcactcagcc tgcgcgccgg ttccctgcgt accattacgc
0071 acatcctgct gccgctgctg cgcccggcga tcctctcggc gctgatttac agctttgtgc gcgccattac
0141 caccgtcagc gccattgtgt tcctcgtcac gccggatacc cgcgtagcga cggcttacat cctcaaccgc
0211 gtggaagatg gcgaatacgg tgtagcgatt gcctacggtt ccattctgat cgtggtgatg ctggcgatta
0281 ttttcatctt tgactggctg atcggtgaat cacgtacctc ccgttcaaaa gccaaaaacc aggcgtaatg
0351 gagcgcacta tgactcagaa aaatttcgtt gaactgcgca acgtcactaa acgatttggc agtaatacgg
0421 taatcgacaa tatcaacctc accatccc
|
