|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Deletion
|
OCR27
(D)
,
OCR27-1
(D)
,
OCR27-6
(D)
,
OCR27-7
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
yaaH
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
yaaH
Search strains by all related name:
yaaH b0010 ECK0010 JW0009
|
General information (Go to Linear View: )
|
|
Gene Name
|
yaaH
|
|
Alternative name
|
b0010,ECK0010,JW0009
|
|
Location, Length
|
9,928 - 10,494
(
-
)
;
0.21
min
;
567
(bp) ,
188
(aa)
|
|
Product
|
inner membrane protein, Grp1_Fun34_YaaH family
|
|
Operon Name
|
yaaH
|
|
Note
|
|
|
Function
|
|
|
Gene Ontology
|
GO:0005886
;
plasma membrane ( yaaH )
GO:0016020
;
membrane ( yaaH )
GO:0016021
;
integral to membrane ( yaaH )
|
|
PID
|
1786191
|
EC number
(KEGG Pathway)
|
|
|
SWISS-PROT
(
Show details
[
1
more]
)
|
Entry name(Acc.no)
|
YAAH_ECOLI
(
P28695
;
Q8KMY2
)
|
|
- Protein name
|
Hypothetical protein yaaH.
|
|
- Synonyms
|
|
|
- Gene name
|
Name=yaaH; OrderedLocusNames=b0010, z0010, ECs0010, SF0011, S0010;
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
yaaH
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
Inner membrane protein yaaH
|
|
PSI-BLAST
|
Glyoxylate pathway regulator
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
hypothetical protein Z0010 [Escherichia coli O157:H7 EDL933]
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
PKC_PHOSPHO_SITE
MYRISTYL
GPR1_FUN34_YAAH
|
| Sequences |
Amino acid
FASTA format
|
0001 MGNTKLANPA PLGLMGFGMT TILLNLHNVG YFALDGIILA MGIFYGGIAQ IFAGLLEYKK GNTFGLTAFT
0071 SYGSFWLTLV AILLMPKLGL TDAPNAQFLG VYLGLWGVFT LFMFFGTLKG ARVLQFVFFS LTVLFALLAI
0141 GNIAGNAAII HFAGWIGLIC GASAIYLAMG EVLNEQFGRT VLPIGESH
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 cactgcccca ctggctgatt attatgccgc
-070 gccctgaaaa cactacagtt attcagggaa attatttcac cattcattcg atgatgattt ttgaggaatt
0001 atgggcaaca ctaagttggc taatccggca ccgctgggcc tgatgggctt cggcatgacc accattctgc
0071 ttaacctgca caacgtgggt tatttcgctc tggacggtat tattcttgcc atgggcattt tctacggcgg
0141 catcgcgcaa atttttgctg gtctgctgga gtacaaaaaa ggcaacactt tcggtttaac cgcattcacc
0211 tcttacggtt ctttctggct gacgctggtt gcgattctgc tgatgccgaa actgggtctg accgatgcgc
0281 caaatgcaca gttccttggt gtctacctgg gtctgtgggg cgtatttacg ctgtttatgt tcttcggcac
0351 gctgaaaggc gcacgcgttc tgcaattcgt tttctttagc ctgaccgtgc tgtttgccct gctggcgatc
0421 ggtaacattg ccggtaacgc cgcaatcatc cactttgccg gctggattgg gctgatctgc ggtgccagcg
0491 caatctatct ggcgatgggt gaagtactga acgagcagtt tggtcgcacc gttctgccga ttggtgaatc
0561 ccactaattg ttttgagatc cccccgctcg gggggatttt tttattcgct aacgtcgcgt cttgcactct
0631 tcggtctgaa tgctgcaacc acttccggtg ccgtttc
|
