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PEC Original Annotations
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Essentiality
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Class
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non-essential
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References (PMID)
|
|
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Deletion
|
OCR27
(D)
,
OCR27-6
(D)
,
OCR27-7
(D)
|
|
Related gene (W3110 PEC)
|
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Gene Search
|
Search MG1655 PEC by gene name:
insL1
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Related strains
|
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Strains Search
|
Search strains by gene name:
insL1
Search strains by all related name:
insL1 b0016 ECK0016 insL
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General information (Go to Linear View: )
|
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Gene Name
|
insL1
|
|
Alternative name
|
b0016,ECK0016,insL
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|
Location, Length
|
15,445 - 16,557
(
+
)
;
0.33
min
;
1113
(bp) ,
370
(aa)
|
|
Product
|
IS186 transposase
|
|
Operon Name
|
insL-1
|
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Note
|
|
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Function
|
IS, phage, Tn; Transposon-related functions; extrachromosomal; transposon related
|
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Gene Ontology
|
GO:0003676
;
nucleic acid binding ( insL1 )
GO:0003677
;
DNA binding ( insL1 )
GO:0004803
;
transposase activity ( insL1 )
GO:0006310
;
DNA recombination ( insL1 )
GO:0006313
;
transposition, DNA-mediated ( insL1 )
|
|
PID
|
1786198
|
EC number
(KEGG Pathway)
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Homology Analysis
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BLAST
|
|
Bacteria
|
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GTOP
|
|
|
PDB
(database updated :
2007.02.20
)
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PSI-BLAST
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SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
|
|
PSI-BLAST
|
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
|
|
Pfam 28.0
(database updated :
2015-05
)
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Pfam
|
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PROSITE
|
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PROSITE
|
|
| Sequences |
Amino acid
FASTA format
|
0001 MNYSHDNWSA ILAHIGKPEE LDTSARNAGA LTRRREIRDA ATLLRLGLAY GPGGMSLREV TAWAQLHDVA
0071 TLSDVALLKR LRNAADWFGI LAAQTLAVRA AVTGCTSGKR LRLVDGTAIS APGGGSAEWR LHMGYDPHTC
0141 QFTDFELTDS RDAERLDRFA QTADEIRIAD RGFGSRPECI RSLAFGEADY IVRVHWRGLR WLTAEGMRFD
0211 MMGFLRGLDC GKNGETTVMI GNSGNKKAGA PFPARLIAVS LPPEKALISK TRLLSENRRK GRVVQAETLE
0281 AAGHVLLLTS LPEDEYSAEQ VADCYRLRWQ IELAFKRLKS LLHLDALRAK EPELAKAWIF ANLLAAFLID
0351 DIIQPSLDFP PRSAGSEKKN
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 GCGTTGAAGA TATGCGAGCA CCTGTAAAGT
-070 GGCGGGGATC ACTCCCATAA GCGCTAACTT AAGGGTTGTG GTATTACGCC TGATATGATT TAACGTGCCG
0001 atgaattact ctcacgataa ctggtcagca attctggccc atattggtaa gcccgaagaa ctggatactt
0071 cggcacgtaa tgccggggct ctaacccgcc gccgcgaaat tcgtgatgct gcaactctgc tacgtctggg
0141 gctggcttac ggccccgggg ggatgtcatt acgtgaagtc actgcatggg ctcagctcca tgacgttgca
0211 acattatctg acgtggctct cctgaagcgg ctgcggaatg ccgccgactg gtttggcata cttgccgcac
0281 aaacacttgc tgtacgcgcc gcagttacgg gttgtacaag cggaaagaga ttgcgtcttg tcgatggaac
0351 agcaatcagt gcgcccgggg gcggcagcgc tgaatggcga ctacatatgg gatatgatcc tcatacctgt
0421 cagttcactg attttgagct aaccgacagc agagacgctg aacggctgga ccgatttgcg caaacggcag
0491 acgagatacg cattgctgac cggggattcg gttcgcgtcc cgaatgtatc cgctcacttg cttttggaga
0561 agctgattat atcgtccggg ttcactggcg aggattgcgc tggttaactg cagaaggaat gcgctttgac
0631 atgatgggtt ttctgcgcgg gctggattgc ggtaagaacg gtgaaaccac tgtaatgata ggcaattcag
0701 gtaataaaaa agccggagct ccctttccgg cacgtctcat tgccgtatca cttcctcccg aaaaagcatt
0771 aatcagtaaa acccgactgc tcagcgagaa tcgtcgaaaa ggacgagtag ttcaggcgga aacgctggaa
0841 gcagcgggcc atgtgctatt gctaacatca ttaccggaag atgaatattc agcagagcaa gtggctgatt
0911 gttaccgtct gcgatggcaa attgaactgg cttttaagcg gctcaaaagt ttgctgcacc tggatgcttt
0981 gcgtgcaaag gaacctgaac tcgcgaaagc gtggatattt gctaatctac tcgccgcatt tttaattgac
1051 gacataatcc agccatcgct ggatttcccc cccagaagtg ccggatccga aaagaagaac taaCTCGTTG
1121 TGGAGAATAA CAAAAATGGT CATCTGGAGC TTACAGGTGG CCATTCGTGG GACAGTATCC CTGACAGCCT
1191 ACAAAACGCA ATTGAAGAAC GCG
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