|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Deletion
|
OCR27
(D)
,
OCR27-5
(D)
,
OCR27-8
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
insA
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
insA
Search strains by all related name:
insA b0022 ECK0023
|
General information (Go to Linear View: )
|
|
Gene Name
|
insA
|
|
Alternative name
|
b0022,ECK0023
|
|
Location, Length
|
20,233 - 20,508
(
-
)
;
0.44
min
;
276
(bp) ,
91
(aa)
|
|
Product
|
IS1 repressor TnpA
|
|
Operon Name
|
insAB-1A-1B-1
|
|
Note
|
|
|
Function
|
IS, phage, Tn; Transposon-related functions; extrachromosomal; transposon related
|
|
Gene Ontology
|
|
|
PID
|
1786204
|
EC number
(KEGG Pathway)
|
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
|
|
PSI-BLAST
|
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
|
| Sequences |
Amino acid
FASTA format
|
0001 MASVSISCPS CSATDGVVRN GKSTAGHQRY LCSHCRKTWQ LQFTYTASQP GTHQKIIDMA MNGVGCRATA
0071 RIMGVGLNTI LRHLKNSGRS R
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 gactccccca caaagaatat ggatattgtg
-070 atacacattg aggtaggtga tgctgccaac ttactgattt agtgtatgat ggtgtttttg aggtgctcca
0001 gtggcttctg tttctatcag ctgtccctcc tgttcagcta ctgacggggt ggtgcgtaac ggcaaaagca
0071 ccgccggaca tcagcgctat ctctgctctc actgccgtaa aacatggcaa ctgcagttca cttacaccgc
0141 ttctcaaccc ggtacgcacc agaaaatcat tgatatggcc atgaatggcg ttggatgccg ggcaacagcc
0211 cgcattatgg gcgttggcct caacacgatt ttacgtcact taaaaaactc aggccgcagt cggtaacctc
0281 gcgcatacag ccgggcagtg acgtcatcgt ctgcgcggaa atggacgaac agtggggcta tgtcggggct
0351 aaatcgcgcc agcgctggct gtttta
|
