|
PEC Original Annotations
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Essentiality
|
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Class
|
essential
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|
References (PMID)
|
|
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Deletion
|
OCR35
(D)
,
OCR35-5
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
tilS
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
tilS
Search strains by all related name:
tilS b0188 ECK0187 JW0183 mesJ yaeN
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General information (Go to Linear View: )
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Gene Name
|
tilS
|
|
Alternative name
|
b0188,ECK0187,JW0183,mesJ,yaeN
|
|
Location, Length
|
212,331 - 213,629
(
+
)
;
4.58
min
;
1299
(bp) ,
432
(aa)
|
|
Product
|
tRNA(Ile)-lysidine synthetase
|
|
Operon Name
|
tilS
|
|
Note
|
|
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Function
|
enzyme; tRNA modification; responsible for lysidine formation in tRNA-Ile anticodon (C34 to L34)
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Gene Ontology
|
GO:0000166
;
nucleotide binding ( tilS )
GO:0005524
;
ATP binding ( tilS )
GO:0005737
;
cytoplasm ( tilS )
GO:0006400
;
tRNA modification ( tilS )
GO:0006412
;
translation ( tilS )
GO:0008033
;
tRNA processing ( tilS )
GO:0016874
;
ligase activity ( tilS )
GO:0016879
;
ligase activity, forming carbon-nitrogen bonds ( tilS )
|
|
PID
|
1786386
|
EC number
(KEGG Pathway)
|
6.1.1.5
|
|
SWISS-PROT
(
Show details
[
2
more]
)
|
Entry name(Acc.no)
|
MESJ_ECOLI
(
P52097
)
|
|
- Protein name
|
Putative cell cycle protein mesJ.
|
|
- Synonyms
|
|
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- Gene name
|
Name=mesJ; OrderedLocusNames=b0188;
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Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
tilS
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
Chain A, Structure Of The Mesj Pp-Atpase From Escherichia Coli
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
tRNA
|
|
PSI-BLAST
|
tRNA
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
tRNA(Ile)-lysidine synthetase [Escherichia coli K12]
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
CAMP_PHOSPHO_SITE
PKC_PHOSPHO_SITE
CK2_PHOSPHO_SITE
MYRISTYL
AMIDATION
|
|
MMBR References
|
GenBank submission Z50870. 1995
Identification of a new Escherichia coli cell cycle gene.
Pichoff, S., and J. Bouche.
|
| Sequences |
Amino acid
FASTA format
|
0001 MTLTLNRQLL TSRQILVAFS GGLDSTVLLH QLVQWRTENP GVALRAIHVH HGLSANADAW VTHCENVCQQ
0071 WQVPLVVERV QLAQEGLGIE AQARQARYQA FARTLLPGEV LVTAQHLDDQ CETFLLALKR GSGPAGLSAM
0141 AEVSEFAGTR LIRPLLARTR GELVQWARQY DLRWIEDESN QDDSYDRNFL RLRVVPLLQQ RWPHFAEATA
0211 RSAALCAEQE SLLDELLADD LAHCQSPQGT LQIVPMLAMS DARRAAIIRR WLAGQNAPMP SRDALVRIWQ
0281 EVALAREDAS PCLRLGAFEI RRYQSQLWWI KSVTGQSENI VPWQTWLQPL ELPAGLGSVQ LNAGGDIRPP
0351 RADEAVSVRF KAPGLLHIVG RNGGRKLKKI WQELGVPPWL RDTTPLLFYG ETLIAAAGVF VTQEGVAEGE
0421 NGVSFVWQKT LS
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 CCGGACGGGC TGCCGTTGGA ACTGTATGAG
-070 CAGTAAGGCT TGTCATCGCC GCATTTGCCC GGTAACGTGC CGGGCATTGC TACTGTAAAA TCGCACCATC
0001 atgacactca cgctcaatag acaacttctc acctcacgcc agattctggt ggcctttagc ggcgggcttg
0071 actccaccgt tctgctgcat cagttggtgc agtggcggac ggaaaatccg ggtgtcgctc tgcgcgctat
0141 tcatgtgcat cacggtttaa gtgccaatgc cgatgcctgg gttacgcatt gcgaaaacgt ctgccaacag
0211 tggcaggtgc cgctggtggt cgaacgcgta caacttgcgc aagaaggact gggcattgag gcccaggcgc
0281 ggcaggcacg ttatcaggca tttgcccgca ccttgttgcc cggtgaagtg ctggtcaccg cgcaacatct
0351 cgacgatcaa tgtgaaacct ttctgctggc gctaaaacgc ggcagtggcc ctgccgggct ttcggctatg
0421 gcggaagtct cggagtttgc cggaacgcgg cttattcgcc cgttgctcgc ccgcacgcgg ggggaactgg
0491 tgcagtgggc gcgtcagtat gatttacgct ggattgaaga cgaaagtaat caggacgact catacgatcg
0561 taactttctg cgcctgcgcg tagtgccgtt attgcagcag cgttggccgc attttgccga agcaacggcc
0631 cgcagcgccg cactttgtgc tgaacaagag agcctgctgg atgaactgct ggcagatgat ttagcacact
0701 gtcaatcgcc gcaggggacg ctgcagattg tgccaatgct ggcgatgagt gatgcccgcc gcgcggcgat
0771 tatccgccgc tggctggcag ggcagaatgc accgatgcct tcccgcgacg cgttggtgag gatctggcag
0841 gaagtggcgc tggcgcggga agatgcctca ccctgtttac gtttgggcgc gtttgaaatc cgacgctatc
0911 agtcgcaact gtggtggatt aaatccgtca ccgggcaaag cgaaaacatt gtgccgtggc agacgtggct
0981 tcaaccgctg gaattaccgg cggggctggg aagtgtacag cttaatgcgg gaggcgatat tcgccctccg
1051 cgtgcagacg aagcggtcag cgtgcgtttc aaagcgccag gattgctgca tattgtcggg cgtaacggcg
1121 gacgtaagct aaagaaaatc tggcaagagc tgggcgtgcc gccgtggcta cgtgacacca cgccactgct
1191 gttttatggc gaaacgctga ttgcggcggc aggggtattt gtgacgcaag aaggtgtggc tgaaggtgag
1261 aatggcgtaa gttttgtctg gcagaaaacg cttagttaaG TGAAAGCCGG ATAAGACGCA TCAAACGTCG
1331 CATCCGGCGA AAGTCAATCA GGATTCGCTT ACCACCACCG TACCGATTTC CGGGTGGCTA AAGCTGGTA
|
