|
PEC Original Annotations
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|
Essentiality
|
|
Class
|
non-essential
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References (PMID)
|
|
|
Deletion
|
OCR27
(D)
,
OCR27-1
(D)
,
OCR27-6
(D)
,
OCR27-7
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
yaaJ
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
yaaJ
Search strains by all related name:
yaaJ b0007 ECK0007 JW0006
|
General information (Go to Linear View: )
|
|
Gene Name
|
yaaJ
|
|
Alternative name
|
b0007,ECK0007,JW0006
|
|
Location, Length
|
6,529 - 7,959
(
-
)
;
0.14
min
;
1431
(bp) ,
476
(aa)
|
|
Product
|
putative transporter
|
|
Operon Name
|
yaaJ
|
|
Note
|
inner membrane transport protein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane
|
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Function
|
putative transport; Transport of small molecules: Amino acids, amines
|
|
Gene Ontology
|
GO:0005283
;
sodium:amino acid symporter activity ( yaaJ )
GO:0005886
;
plasma membrane ( yaaJ )
GO:0006810
;
transport ( yaaJ )
GO:0006814
;
sodium ion transport ( yaaJ )
GO:0015293
;
symporter activity ( yaaJ )
GO:0016020
;
membrane ( yaaJ )
GO:0016021
;
integral to membrane ( yaaJ )
|
|
PID
|
1786188
|
EC number
(KEGG Pathway)
|
|
|
SWISS-PROT
(
Show details
[
2
more]
)
|
Entry name(Acc.no)
|
YAAJ_ECOLI
(
P30143
)
|
|
- Protein name
|
Putative transporter yaaJ.
|
|
- Synonyms
|
|
|
- Gene name
|
Name=yaaJ; OrderedLocusNames=b0007;
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Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
yaaJ
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
Putative transporter yaaJ
|
|
PSI-BLAST
|
Putative transporter yaaJ
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
predicted transporter [Escherichia coli K12]
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
ASN_GLYCOSYLATION
PKC_PHOSPHO_SITE
CK2_PHOSPHO_SITE
TYR_PHOSPHO_SITE
MYRISTYL
PROKAR_LIPOPROTEIN
NA_ALANINE_SYMP
|
| Sequences |
Amino acid
FASTA format
|
0001 MPDFFSFINS VLWGSVMIYL LFGAGCWFTF RTGFVQFRYI RQFGKSLKNS IHPQPGGLTS FQSLCTSLAA
0071 RVGSGNLAGV ALAITAGGPG AVFWMWVAAF IGMATSFAEC SLAQLYKERD VNGQFRGGPA WYMARGLGMR
0141 WMGVLFAVFL LIAYGIIFSG VQANAVARAL SFSFDFPPLV TGIILAVFTL LAITRGLHGV ARLMQGFVPL
0211 MAIIWVLTSL VICVMNIGQL PHVIWSIFES AFGWQEAAGG AAGYTLSQAI TNGFQRSMFS NEAGMGSTPN
0281 AAAAAASWPP HPAAQGIVQM IGIFIDTLVI CTASAMLILL AGNGTTYMPL EGIQLIQKAM RVLMGSWGAE
0351 FVTLVVILFA FSSIVANYIY AENNLFFLRL NNPKAIWCLR ICTFATVIGG TLLSLPLMWQ LADIIMACMA
0421 ITNLTAILLL SPVVHTIASD YLRQRKLGVR PVFDPLRYPD IGRQLSPDAW DDVSQE
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 acgcagaagt tatcaagtac ctcgtagcgt
-070 atatacttct taaacaattg gtaacgttta cacaggaaag tcatcgcgac cggcaataag agggatatgc
0001 atgccagatt ttttctcctt cattaacagc gtcctttggg gatcggtaat gatttacctg ctcttcggcg
0071 caggttgttg gttcactttt cgcaccggat ttgtgcagtt tcgctacatc cgccagtttg gcaaaagtct
0141 taaaaatagc attcatccac agccaggcgg tttaacctca tttcagtcat tgtgtaccag tcttgcggcg
0211 cgcgtgggta gcggcaacct ggccggcgtt gcgctggcta ttaccgccgg tggacctgga gccgtctttt
0281 ggatgtgggt tgccgcgttt atcggcatgg cgacctcgtt tgccgaatgt tctctggcac aactttataa
0351 agaacgtgac gtcaatgggc agtttcgtgg cggaccggca tggtatatgg cgcgcgggct ggggatgcgc
0421 tggatgggcg ttctgttcgc cgtctttttg ctcatcgcct atggcataat tttcagcgga gttcaagcga
0491 acgccgttgc ccgcgccctg agtttttctt ttgattttcc cccgctggtg acaggcatta ttctcgctgt
0561 ctttactctg ctggcaatca ctcgcggtct tcatggcgtc gcccggctca tgcagggctt tgtcccgttg
0631 atggcgataa tctgggtact gaccagcctg gtaatttgcg taatgaatat cgggcaactt ccccacgtca
0701 tttggtctat ttttgagagt gcttttggct ggcaggaagc ggcaggcggc gcggcgggat ataccttaag
0771 ccaggcgatt actaacggtt ttcagcgcag tatgttttcc aatgaggcgg gaatgggttc gacgccaaac
0841 gcggcagcgg cagcggcgtc ctggcctccg catccggcag cgcaagggat tgtccagatg attggcattt
0911 ttatcgacac cctggtcatc tgtacggcaa gcgccatgct gatattactg gcgggtaacg gcacaaccta
0981 catgccgctg gaaggtattc agcttatcca gaaggcgatg cgggtgctaa tgggttcctg gggtgctgag
1051 tttgttaccc ttgtggttat tctgtttgcc ttcagctcca tcgttgccaa ctacatttat gccgaaaaca
1121 atctcttctt tttacgcctg aacaacccta aagcgatctg gtgtttgcgg atctgcacct tcgcaacggt
1191 catcggcggc accttgctaa gccttccgct gatgtggcaa ctggcagata tcataatggc ctgcatggct
1261 attaccaatt tgaccgccat tttactgctc tcgcctgtgg ttcataccat tgccagtgat tatctacgcc
1331 agcgtaaact cggcgtgcgc ccggtgtttg atccattgcg ttatccggat atcggtcgcc agctttctcc
1401 ggacgcgtgg gatgatgttt cgcaggagta atcacaacta tcgatcaact cattctcatt ttttgctaaa
1471 gtcggcataa atttcctgca aggactggat atgctgattc ttatttcacc tgcgaaaacg c
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