|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
Escherichia coli and Salmonella, Cellular and Molecular Biology Second Edition. ASM Press. 1996
Neidhart, F.C.
|
|
|
Deletion
|
OCR27
(D)
,
OCR27-1
(D)
,
OCR27-6
(D)
,
OCR27-7
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
talB
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
talB
Search strains by all related name:
talB b0008 ECK0008 JW0007 yaaK
|
General information (Go to Linear View: )
|
|
Gene Name
|
talB
|
|
Alternative name
|
b0008,ECK0008,JW0007,yaaK
|
|
Location, Length
|
8,238 - 9,191
(
+
)
;
0.18
min
;
954
(bp) ,
317
(aa)
|
|
Product
|
transaldolase B
|
|
Operon Name
|
talB
|
|
Note
|
GO_component: GO:0005737 - cytoplasm; GO_process: GO:0009052 - pentose-phosphate shunt, non-oxidative branch
|
|
Function
|
enzyme; Central intermediary metabolism: Non-oxidative branch, pentose pathway,1.7.3 metabolism; central intermediary metabolism; pentose phosphate shunt, non-oxidative branch,7.1 location of gene products; cytoplasm
|
|
Gene Ontology
|
GO:0003824
;
catalytic activity ( talB )
GO:0004801
;
transaldolase activity ( talB )
GO:0005624
;
membrane fraction ( talB )
GO:0005737
;
cytoplasm ( talB )
GO:0005975
;
carbohydrate metabolic process ( talB )
GO:0006098
;
pentose-phosphate shunt ( talB )
GO:0008152
;
metabolic process ( talB )
GO:0016740
;
transferase activity ( talB )
|
|
PID
|
1786189
|
EC number
(KEGG Pathway)
|
2.2.1.2
|
|
Verified Protein Starts
(data
compiled from literature and appropriate citations are available from EcoGene)
|
|
EcoGene
|
talB
(
EG11556
)
|
|
Number of removed
|
1 aa cleaved
|
|
SWISS-PROT
(
Show details
[
1
more]
)
|
Entry name(Acc.no)
|
TALB_ECOLI
(
P30148
)
|
|
- Protein name
|
Transaldolase B
|
|
- Synonyms
|
EC 2.2.1.2
|
|
- Gene name
|
Name=talB; OrderedLocusNames=b0008, z0008, ECs0008, SF0009, S0008;
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
talB
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
Chain A, Complex Of Transaldolase With The Reduced Schiff-Base Intermediate
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
Transaldolase B
|
|
PSI-BLAST
|
Transaldolase B
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
transaldolase B [Shigella flexneri 5 str. 8401]
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
ASN_GLYCOSYLATION
CAMP_PHOSPHO_SITE
PKC_PHOSPHO_SITE
CK2_PHOSPHO_SITE
TYR_PHOSPHO_SITE
MYRISTYL
TRANSALDOLASE_2
TRANSALDOLASE_1
|
|
MMBR References
|
J Bacteriol. 1995;177:5930-5936
Transaldolase B of Escherichia coli K-12: cloning of its gene, talB, and characterization of the enzyme from recombinant strains.
Sprenger, G. A., U. Schorken, G. Sprenger, and H. Sahm.
|
| Sequences |
Amino acid
FASTA format
|
0001 MTDKLTSLRQ YTTVVADTGD IAAMKLYQPQ DATTNPSLIL NAAQIPEYRK LIDDAVAWAK QQSNDRAQQI
0071 VDATDKLAVN IGLEILKLVP GRISTEVDAR LSYDTEASIA KAKRLIKLYN DAGISNDRIL IKLASTWQGI
0141 RAAEQLEKEG INCNLTLLFS FAQARACAEA GVFLISPFVG RILDWYKANT DKKEYAPAED PGVVSVSEIY
0211 QYYKEHGYET VVMGASFRNI GEILELAGCD RLTIAPALLK ELAESEGAIE RKLSYTGEVK ARPARITESE
0281 FLWQHNQDPM AVDKLAEGIR KFAIDQEKLE KMIGDLL
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 ATAACCGTCT TGTCGGCGGT TGCGCTGACG
-070 TTGCGTCGTG ATATCATCAG GGCAGACCGG TTACATCCCC CTAACAAGCT GTTTAAAGAG AAATACTATC
0001 atgacggaca aattgacctc ccttcgtcag tacaccaccg tagtggccga cactggggac atcgcggcaa
0071 tgaagctgta tcaaccgcag gatgccacaa ccaacccttc tctcattctt aacgcagcgc agattccgga
0141 ataccgtaag ttgattgatg atgctgtcgc ctgggcgaaa cagcagagca acgatcgcgc gcagcagatc
0211 gtggacgcga ccgacaaact ggcagtaaat attggtctgg aaatcctgaa actggttccg ggccgtatct
0281 caactgaagt tgatgcgcgt ctttcctatg acaccgaagc gtcaattgcg aaagcaaaac gcctgatcaa
0351 actctacaac gatgctggta ttagcaacga tcgtattctg atcaaactgg cttctacctg gcagggtatc
0421 cgtgctgcag aacagctgga aaaagaaggc atcaactgta acctgaccct gctgttctcc ttcgctcagg
0491 ctcgtgcttg tgcggaagcg ggcgtgttcc tgatctcgcc gtttgttggc cgtattcttg actggtacaa
0561 agcgaatacc gataagaaag agtacgctcc ggcagaagat ccgggcgtgg tttctgtatc tgaaatctac
0631 cagtactaca aagagcacgg ttatgaaacc gtggttatgg gcgcaagctt ccgtaacatc ggcgaaattc
0701 tggaactggc aggctgcgac cgtctgacca tcgcaccggc actgctgaaa gagctggcgg agagcgaagg
0771 ggctatcgaa cgtaaactgt cttacaccgg cgaagtgaaa gcgcgtccgg cgcgtatcac tgagtccgag
0841 ttcctgtggc agcacaacca ggatccaatg gcagtagata aactggcgga aggtatccgt aagtttgcta
0911 ttgaccagga aaaactggaa aaaatgatcg gcgatctgct gtaaTCATTC TTAGCGTGAC CGGGAAGTCG
0981 GTCACGCTAC CTCTTCTGAA GCCTGTCTGT CACTCCCTTC GCAGTGTATC ATTCTGTTTA ACGAGACTGT
1051 TTAA
|
