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PEC Original Annotations
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Essentiality
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Class
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unknown
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References (PMID)
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Deletion
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Related gene (W3110 PEC)
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Gene Search
|
Search MG1655 PEC by gene name:
arcZ
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Related strains
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Strains Search
|
Search strains by gene name:
arcZ
Search strains by all related name:
arcZ b4450 ECK3199 JWR0254 psrA16 ryhA sraH
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General information (Go to Linear View: )
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misc_RNA Name
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arcZ
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Alternative name
|
b4450,ECK3199,JWR0254,psrA16,ryhA,sraH
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Location, Length
|
3,348,599 - 3,348,719
(
+
)
;
72.17
min
;
121
(bp) ,
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Product
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sRNA positive antisense regulator of rpoS; binds Hfq
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Operon Name
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Note
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identified in a large scale screen
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Function
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Gene Ontology
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PID
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EC number
(KEGG Pathway)
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Homology Analysis
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BLAST
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Bacteria
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GTOP
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PDB
(database updated :
2007.02.20
)
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PSI-BLAST
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SWISS-PROT
(database updated :
2007.02.20
)
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BLAST
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PSI-BLAST
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nr
(database updated :
2007.02.20
)
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BLAST
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Pfam 28.0
(database updated :
2015-05
)
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Pfam
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PROSITE
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PROSITE
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| Sequences |
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 AATTGACTGA AACACATTAA TTTTTTTAAT
-070 AAAAATGGTA CGCATCACAC ATTTAACTGA TTCATGTAAC AAATCATTTA AGTTTTGCTA TCTTAACTGC
0001 gtgcggcctg aaaaacagtg ctgtgccctt gtaactcatc ataataattt acggcgcagc caagatttcc
0071 ctggtgttgg cgcagtattc gcgcaccccg gtctagccgg ggtcattttt tAGTGGCTTT TGCCACCCAC
0141 GCTTTCAGCA CTTCTACGTC GTGACGCCAC TCTTCTTTCA TCTCTTCAAT CCATTCACCG ACGTTATCTT
0211 CCCAGGCCGG A
|
